Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863679.1_cds_XP_016515763.1_28074
CDS Infomation

[gene=LOC107832429] [db_xref=GeneID:107832429] [protein=pentatricopeptide repeat-containing protein At1g11900-like] [protein_id=XP_016515763.1] [location=complement(join(4351..5403,6053..6217))] [gbkey=CDS]
Sequence

ATGGTAGCAGCTGCTTTGAGTGGCAGAGCAAAGCTGAACACTTTAACTTTCTTATGCCAT
TCTTGTTTCAATCGATTGAACTACAGTATCTCTGTTGGATTACACTCTGCGAAAGGAATT
CGGCCATTCAATACACTGCATCGGTGTAGAAATTTCTTTCTTAACAATTGTATTAAATCC
ATCCCAGTTGGAGCCCTCTTAGATTGGCCAACTTTTTCTCCTAGTATTTTGTTCGTCAGC
TGCCAATCAATCTCAACCCAAGCATCCCCTGCTGAATTTGTCGATGAAGCGTTGACAGAA
GTCCTTTCGGTTATGGTTAATTCGCAAAATTCAGGAGAGGAACTCTGTGCTGCTTATGTT
GATAAGTTTTGCAATGACAGAAATCTATCTGCAGCCGCTAAGCTATTGCAGACTTTGCAT
GATAAAAATATCCTCCTTCCCCCCAGTGCATACAATCGCCTTCTGAAAGCTGCAGGCGAG
GAAAACGACGTCGACCTTCTATGTCAAAGTTTCAAGGATCTGTTAGTATCTTGCAAATCT
CTGAATTCATCTACATATCTTATCTTTGCTCAGGCTTTTATCAAGCAAAATGATGTTGCC
TGCTTGCTAAGATTTGTCCGGGAGATCTCTGAGTTGATTTTTCCAAGTACTACTACTACT
ACTACAGTTTTGAATAGGATCATATTTGCCTTTGCCGAGTGTGGACAGGTTGATAAGGCC
TTGATGATTTTTGATCAGATGAAGAGTTTGAAATCCAAACCTGATGTGATTACATATAAC
ACCATTTTGGGAATCTTAGGCCGGTGTGGTAGAATAGATGAAATGCTTAAAGAGTTTGTG
GCCATGAAAGAGGATAATCTAATTCCTGATATTTTTTCTTATAATACCTTAATTACTGGA
TTGCGAAAGGTTGGCAGGCTTGAGTCATGCTTAGTATTTTTCAAGGAGATGTGTGAGAGA
GGAATTGAACCAGATTTGCGGACTTATAGTGCTCTGATTGACAGCTTTGGAAAATCTGGT
AATATTGAGGAATCACTGAGACTTTTTAATGAGATAAAGCACCGTGGAATCTGTCCATCA
ATTCATGTTTACAGATCATTGATCAGTAATTTAAAGAAGATGGGGAAGTTGGAGTTGGCT
GTTGCTTTTTCAAATGAGATGAAGGAATCAATCTCAAATCATTGTGGACCAAACCATATT
CAACAGAGAAACAGATAG

Peptide Sequence

PEP ID

XP_016515763.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g11900-like [Nicotiana tabacum]
Sequence

MVAAALSGRAKLNTLTFLCHSCFNRLNYSISVGLHSAKGIRPFNTLHRCRNFFLNNCIKS
IPVGALLDWPTFSPSILFVSCQSISTQASPAEFVDEALTEVLSVMVNSQNSGEELCAAYV
DKFCNDRNLSAAAKLLQTLHDKNILLPPSAYNRLLKAAGEENDVDLLCQSFKDLLVSCKS
LNSSTYLIFAQAFIKQNDVACLLRFVREISELIFPSTTTTTTVLNRIIFAFAECGQVDKA
LMIFDQMKSLKSKPDVITYNTILGILGRCGRIDEMLKEFVAMKEDNLIPDIFSYNTLITG
LRKVGRLESCLVFFKEMCERGIEPDLRTYSALIDSFGKSGNIEESLRLFNEIKHRGICPS
IHVYRSLISNLKKMGKLELAVAFSNEMKESISNHCGPNHIQQRNR

Transcript Sequence

Gene sequence data has not been registered.